Sequence Similarity Clusters for the Entities in PDB 2NY7

Entity #1 | Chains: G
ENVELOPE GLYCOPROTEIN GP120 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 14074
95 % 8 15 3824
90 % 8 15 3859
70 % 50 126 179
50 % 50 126 216
40 % 50 126 238
30 % 50 129 241
Entity #2 | Chains: H
ANTIBODY b12, HEAVY CHAIN protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56538
95 % 3 3 17165
90 % 3 3 16818
70 % 806 2111 1
50 % 1669 4367 1
40 % 1669 4367 1
30 % 1874 5151 1
Entity #3 | Chains: L
ANTIBODY b12, LIGHT CHAIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 12198
95 % 3 4 11738
90 % 3 4 11556
70 % 670 1775 2
50 % 1670 4367 1
40 % 1670 4367 1
30 % 1875 5151 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.