Sequence Similarity Clusters for the Entities in PDB 2NY7

Entity #1 | Chains: G
ENVELOPE GLYCOPROTEIN GP120 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 13330
95 % 8 15 3602
90 % 8 15 3643
70 % 48 122 167
50 % 48 122 198
40 % 48 122 215
30 % 48 125 226
Entity #2 | Chains: H
ANTIBODY b12, HEAVY CHAIN protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53809
95 % 3 3 16303
90 % 3 3 15979
70 % 748 1952 1
50 % 1541 4026 1
40 % 1542 4028 1
30 % 1725 4764 1
Entity #3 | Chains: L
ANTIBODY b12, LIGHT CHAIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11535
95 % 3 4 11174
90 % 3 4 11006
70 % 627 1653 3
50 % 1542 4026 1
40 % 1543 4028 1
30 % 1726 4764 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.