Sequence Similarity Clusters for the Entities in PDB 2NWN

Entity #1 | Chains: A
Plasminogen activator, urokinase protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 45 806
95 % 90 112 311 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.6
PDBFlex
90 % 90 112 329
70 % 90 117 350
50 % 90 117 406
40 % 92 128 368
30 % 1423 1845 6
Entity #2 | Chains: B
upain-1 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.