Sequence Similarity Clusters for the Entities in PDB 2NUG

Entity #1 | Chains: C,D
5'-R(P*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*G)-3' rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E,F
5'-R(P*AP*GP*UP*GP*GP*CP*CP*UP*UP*GP*C)-3' rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
Ribonuclease III protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 2897
95 % 1 11 2266
90 % 1 11 2303
70 % 1 11 2305
50 % 1 11 2312
40 % 1 11 2311
30 % 1 14 1772

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.