Sequence Similarity Clusters for the Entities in PDB 2NUF

Entity #1 | Chains: C,D
28-MER rna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Ribonuclease III protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 3329
95 % 6 11 2653 Flexibility: Medium
Max RMSD: 14.3, Avg RMSD: 8.7
PDBFlex
90 % 6 11 2700
70 % 6 11 2679
50 % 6 11 2652
40 % 6 11 2611
30 % 9 14 2007

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.