Sequence Similarity Clusters for the Entities in PDB 2MKI

Entity #1 | Chains: A
Cytoplasmic polyadenylation element-binding protein 4 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42188
95 % 1 2 32027
90 % 1 2 30623
70 % 1 2 27341
50 % 1 2 23326
40 % 2 4 13087
30 % 2 4 11216
Entity #2 | Chains: B
RNA (5'-R(*CP*UP*UP*UP*A)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures