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NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG
Sequence Clustering and Redundancy Reduction Results
2ME6
Sequence Clusters for the Sequence Entities in PDB 2ME6
Entity #1: Chains: A - Homeobox protein GBX-1 protein, length: 71 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 24154
95% 1 3 20118
90% 1 3 19503
70% 1 3 17908
50% 1 3 15670
40% 2 4 9274
30% 29 80 368
Entity #2: Chains: B,C - DNA (5'-D(*CP*GP*AP*CP*TP*AP*AP*TP*TP*AP*GP*TP*CP*G)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.