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An Information Portal to 105097 Biological Macromolecular Structures

NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG
Sequence Clustering and Redundancy Reduction Results
2ME6
Sequence Clusters for the Sequence Entities in PDB 2ME6
Entity #1: Chains: A - Homeobox protein GBX-1 protein, length: 71 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 22594
95% 1 3 18892
90% 1 3 18337
70% 1 3 16871
50% 1 3 14812
40% 2 4 8758
30% 27 78 375
Entity #2: Chains: B,C - DNA (5'-D(*CP*GP*AP*CP*TP*AP*AP*TP*TP*AP*GP*TP*CP*G)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.