Sequence Similarity Clusters for the Entities in PDB 2MAP

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 21164
95 % 3 3 18145
90 % 3 3 17659
70 % 3 3 16326
50 % 3 3 14252
40 % 3 3 12742
30 % 3 3 10925
Entity #2 | Chains: B
DNA dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4LUP 1 A, C RNA polymerase sigma factor UNP residues 3-92 562
2 2MAO 1 A RNA polymerase sigma factor 562
3 2MAP 1 A RNA polymerase sigma factor 562