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Solution structure of the complex formed by the region 2 of E. coli sigmaE and its cognate -10 promoter element non template strand TGTCAAA.
Sequence Clustering and Redundancy Reduction Results
2MAP
Cluster # 10872 Members. Sequence cutoff: 40% Cluster size: 3 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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  Download      Details  
1 4LUP 1 A, C RNA polymerase sigma factor UNP residues 3-92 562  
2 2MAO 1 A RNA polymerase sigma factor 536056  
3 2MAP 1 A RNA polymerase sigma factor 536056  
 
Sequence Clusters for the Sequence Entities in PDB 2MAP
Entity #1: Chains: A - RNA polymerase sigma factor protein, length: 96 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 17590
95% 3 3 15267
90% 3 3 14893
70% 3 3 13824
50% 3 3 12117
40% 3 3 10872
30% 3 3 9405
Entity #2: Chains: B - DNA dna, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.