Sequence Similarity Clusters for the Entities in PDB 2MAP

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24387
95 % 3 3 20806
90 % 3 3 20217
70 % 3 3 18570
50 % 3 3 16108
40 % 3 3 14348
30 % 3 3 12275
Entity #2 | Chains: B
DNA dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4LUP 1 A, C RNA polymerase sigma factor UNP residues 3-92 562
2 2MAO 1 A RNA polymerase sigma factor 562
3 2MAP 1 A RNA polymerase sigma factor 562