Sequence Similarity Clusters for the Entities in PDB 2MAP

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 22537
95 % 3 3 19265
90 % 3 3 18746
70 % 3 3 17296
50 % 3 3 15078
40 % 3 3 13450
30 % 3 3 11518
Entity #2 | Chains: B
DNA dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.