Sequence Similarity Clusters for the Entities in PDB 2MAP

Entity #1 | Chains: A
RNA polymerase sigma factor protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24988
95 % 3 3 22099
90 % 4 4 15671
70 % 4 4 14654
50 % 4 4 12917
40 % 4 4 11586
30 % 4 4 9841
Entity #2 | Chains: B
DNA dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures