Sequence Similarity Clusters for the Entities in PDB 2M8D

Entity #1 | Chains: A
RNA (5'-R(*UP*GP*AP*AP*GP*GP*AP*C)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
Serine/arginine-rich splicing factor 1 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 41472
95 % 1 2 30990
90 % 1 2 29693
70 % 1 2 26565
50 % 1 2 22839
40 % 1 2 20189
30 % 1 2 17101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.