Sequence Similarity Clusters for the Entities in PDB 2M8D

Entity #1 | Chains: A
RNA (5'-R(*UP*GP*AP*AP*GP*GP*AP*C)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
Serine/arginine-rich splicing factor 1 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47065
95 % 1 2 39097
90 % 1 2 37251
70 % 1 2 32993
50 % 1 2 28027
40 % 1 2 24563
30 % 1 2 20459

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures