Sequence Similarity Clusters for the Entities in PDB 2M8D

Entity #1 | Chains: A
RNA (5'-R(*UP*GP*AP*AP*GP*GP*AP*C)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
Serine/arginine-rich splicing factor 1 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48531
95 % 1 2 36194
90 % 1 2 34552
70 % 1 2 30696
50 % 1 2 26212
40 % 1 2 23105
30 % 1 2 19556

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures