Sequence Similarity Clusters for the Entities in PDB 2M8D

Entity #1 | Chains: A
RNA (5'-R(*UP*GP*AP*AP*GP*GP*AP*C)-3') rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
Serine/arginine-rich splicing factor 1 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47967
95 % 1 2 39856
90 % 1 2 37955
70 % 1 2 33573
50 % 1 2 28546
40 % 1 2 25037
30 % 1 2 20864

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures