Sequence Similarity Clusters for the Entities in PDB 2M14

Entity #1 | Chains: A
RNA polymerase II transcription factor B subunit 1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 6888
95 % 5 10 7471
90 % 5 10 7426
70 % 5 10 7226
50 % 5 10 6656
40 % 5 10 6204
30 % 5 10 5550
Entity #2 | Chains: B
DNA repair protein RAD4 protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75153
95 % 1 1 52240
90 % 1 1 49531
70 % 1 1 43352
50 % 1 1 36958
40 % 1 1 32538
30 % 1 1 27526

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures