Sequence Similarity Clusters for the Entities in PDB 2M14

Entity #1 | Chains: A
RNA polymerase II transcription factor B subunit 1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 6985
95 % 5 10 7572
90 % 5 10 7528
70 % 5 10 7323
50 % 5 10 6747
40 % 5 10 6284
30 % 5 10 5626
Entity #2 | Chains: B
DNA repair protein RAD4 protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75989
95 % 1 1 52810
90 % 1 1 50053
70 % 1 1 43798
50 % 1 1 37334
40 % 1 1 32873
30 % 1 1 27812

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures