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An Information Portal to 105906 Biological Macromolecular Structures

High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data
Sequence Clustering and Redundancy Reduction Results
2LTQ
Sequence Clusters for the Sequence Entities in PDB 2LTQ
Entity #1: Chains: A,D - Disulfide bond formation protein B protein, length: 176 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 16722
95% 5 8 4822
90% 5 8 4840
70% 5 8 4776
50% 5 8 4562
40% 5 8 4278
30% 5 8 3877
Entity #2: Chains: B,E - Fab fragment light chain protein, length: 239 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 15598
95% 50 50 394
90% 79 79 194
70% 1318 1330 3
50% 3138 3162 1
40% 3139 3163 1
30% 3710 3739 1
Entity #3: Chains: C,F - Fab fragment heavy chain protein, length: 221 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 15912
95% 2 2 14095
90% 10 10 3122
70% 1516 1524 2
50% 3139 3162 1
40% 3140 3163 1
30% 3711 3739 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.