Sequence Similarity Clusters for the Entities in PDB 2LTQ

Entity #1 | Chains: A,D
Disulfide bond formation protein B protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19121
95 % 5 8 5529
90 % 5 8 5523
70 % 5 8 5413
50 % 5 8 5105
40 % 5 8 4797
30 % 5 8 4332
Entity #2 | Chains: B,E
Fab fragment light chain protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 17832
95 % 50 50 448
90 % 79 79 270
70 % 1571 1583 3
50 % 3822 3846 1
40 % 3823 3847 1
30 % 4545 4574 1
Entity #3 | Chains: C,F
Fab fragment heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18197
95 % 2 2 15965
90 % 13 13 2527
70 % 1858 1866 1
50 % 3823 3846 1
40 % 3824 3847 1
30 % 4546 4574 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.