Sequence Similarity Clusters for the Entities in PDB 2LOX

Entity #1 | Chains: A
RNA polymerase II transcription factor B subunit 1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 10 6878
95 % 6 10 7455
90 % 6 10 7409
70 % 6 10 7212
50 % 6 10 6646
40 % 6 10 6192
30 % 6 10 5538
Entity #2 | Chains: B
DNA repair protein RAD2 protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74530
95 % 1 1 51730
90 % 1 1 49044
70 % 1 1 42993
50 % 1 1 36653
40 % 1 1 32248
30 % 1 1 27244

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures