Sequence Similarity Clusters for the Entities in PDB 2LOX

Entity #1 | Chains: A
RNA polymerase II transcription factor B subunit 1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 10 7000
95 % 6 10 7585
90 % 6 10 7541
70 % 6 10 7335
50 % 6 10 6757
40 % 6 10 6297
30 % 6 10 5638
Entity #2 | Chains: B
DNA repair protein RAD2 protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75550
95 % 1 1 52412
90 % 1 1 49667
70 % 1 1 43520
50 % 1 1 37091
40 % 1 1 32642
30 % 1 1 27579

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures