Sequence Similarity Clusters for the Entities in PDB 2JGZ

Entity #1 | Chains: A
CELL DIVISION PROTEIN KINASE 2 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 350 365 23
95 % 365 380 34
90 % 365 380 38
70 % 365 380 44
50 % 387 405 67
40 % 417 462 49
30 % 3491 3961 2
Entity #2 | Chains: B
G2/MITOTIC-SPECIFIC CYCLIN-B1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58908
95 % 5 6 9177 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 5 6 9092
70 % 5 6 8731
50 % 5 6 7932
40 % 5 6 7307
30 % 103 115 242

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures