Sequence Similarity Clusters for the Entities in PDB 2JGZ

Entity #1 | Chains: A
CELL DIVISION PROTEIN KINASE 2 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 351 366 26
95 % 368 383 34
90 % 368 383 38
70 % 368 383 46
50 % 399 433 65
40 % 420 465 54
30 % 3781 4300 2
Entity #2 | Chains: B
G2/MITOTIC-SPECIFIC CYCLIN-B1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48319
95 % 5 6 8743 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 5 6 8661
70 % 5 6 8347
50 % 5 6 7648
40 % 5 6 7028
30 % 103 115 259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures