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STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
Sequence Clustering and Redundancy Reduction Results
2JEA
Sequence Clusters for the Sequence Entities in PDB 2JEA
Entity #1: Chains: A - EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 9 423
95% 3 10 582
90% 3 10 614
70% 3 10 660
50% 3 10 746
40% 7 19 519
30% 7 20 519
Entity #2: Chains: B - EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 11144
95% 3 10 583
90% 3 10 615
70% 3 10 661
50% 7 19 486
40% 7 20 511
30% 11 35 361
Entity #3: Chains: C - RNA rna, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: I - EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 15064
95% 3 6 6805
90% 3 6 6758
70% 3 6 6533
50% 3 6 6014
40% 3 6 5568
30% 3 6 4968
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.