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An Information Portal to 106082 Biological Macromolecular Structures

STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
Sequence Clustering and Redundancy Reduction Results
2JEA
Sequence Clusters for the Sequence Entities in PDB 2JEA
Entity #1: Chains: A - EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 9 429
95% 3 10 589
90% 3 10 622
70% 3 10 681
50% 3 10 764
40% 7 19 527
30% 7 20 525
Entity #2: Chains: B - EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 11397
95% 3 10 590
90% 3 10 623
70% 3 10 682
50% 7 19 493
40% 7 20 518
30% 11 35 369
Entity #3: Chains: C - RNA rna, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: I - EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 15403
95% 3 6 6965
90% 3 6 6921
70% 3 6 6684
50% 3 6 6138
40% 3 6 5686
30% 3 6 5069
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.