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STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
Sequence Clustering and Redundancy Reduction Results
2JEA
Sequence Clusters for the Sequence Entities in PDB 2JEA
Entity #1: Chains: A - EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 9 444
95% 3 10 611
90% 3 10 642
70% 3 10 696
50% 3 10 782
40% 7 19 541
30% 7 20 532
Entity #2: Chains: B - EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 11683
95% 3 10 613
90% 3 10 644
70% 3 10 697
50% 7 19 500
40% 7 20 529
30% 11 35 377
Entity #3: Chains: C - RNA rna, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: I - EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 15750
95% 3 6 7105
90% 3 6 7055
70% 3 6 6811
50% 3 6 6242
40% 3 6 5787
30% 3 6 5144
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.