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STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
Sequence Clustering and Redundancy Reduction Results
2JEA
Sequence Clusters for the Sequence Entities in PDB 2JEA
Entity #1: Chains: A - EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 9 433
95% 3 10 594
90% 3 10 625
70% 3 10 684
50% 3 10 767
40% 7 19 534
30% 7 20 528
Entity #2: Chains: B - EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 11518
95% 3 10 595
90% 3 10 626
70% 3 10 685
50% 7 19 494
40% 7 20 522
30% 11 35 373
Entity #3: Chains: C - RNA rna, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: I - EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 15552
95% 3 6 7011
90% 3 6 6965
70% 3 6 6723
50% 3 6 6166
40% 3 6 5717
30% 3 6 5091
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.