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STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
Sequence Clustering and Redundancy Reduction Results
2JEA
Sequence Clusters for the Sequence Entities in PDB 2JEA
Entity #1: Chains: A - EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 9 470
95% 3 10 640
90% 3 10 672
70% 3 10 725
50% 3 10 816
40% 7 19 583
30% 7 20 573
Entity #2: Chains: B - EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 5 12126
95% 3 10 641
90% 3 10 673
70% 3 10 728
50% 7 19 542
40% 7 20 570
30% 11 37 382
Entity #3: Chains: C - RNA rna, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: I - EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 16331
95% 3 6 7360
90% 3 6 7303
70% 3 6 7039
50% 3 6 6438
40% 3 6 5964
30% 3 6 5305
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.