Sequence Similarity Clusters for the Entities in PDB 2JE6

Entity #1 | Chains: A
EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 699
95 % 1 10 898 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 1 10 932
70 % 1 10 967
50 % 1 10 1012
40 % 1 19 766
30 % 1 20 746
Entity #2 | Chains: B
EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15005
95 % 1 10 899 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 1 10 933
70 % 1 10 968
50 % 1 19 732
40 % 1 20 752
30 % 1 42 478
Entity #3 | Chains: I
EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20167
95 % 1 6 9062 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.4
PDBFlex
90 % 1 6 8981
70 % 1 6 8627
50 % 1 6 7810
40 % 1 6 7181
30 % 1 6 6345

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.