Sequence Similarity Clusters for the Entities in PDB 2JE6

Entity #1 | Chains: A
EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 712
95 % 1 10 916 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 1 10 948
70 % 1 10 980
50 % 1 10 1026
40 % 1 19 778
30 % 1 20 756
Entity #2 | Chains: B
EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15214
95 % 1 10 917 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 1 10 949
70 % 1 10 982
50 % 1 19 743
40 % 1 20 761
30 % 1 42 485
Entity #3 | Chains: I
EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20426
95 % 1 6 9180 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.4
PDBFlex
90 % 1 6 9088
70 % 1 6 8715
50 % 1 6 7899
40 % 1 6 7265
30 % 1 6 6414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures