Sequence Similarity Clusters for the Entities in PDB 2JE6

Entity #1 | Chains: A
EXOSOME COMPLEX EXONUCLEASE 2 protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 704
95 % 1 10 906 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 1 10 940
70 % 1 10 974
50 % 1 10 1020
40 % 1 19 774
30 % 1 20 753
Entity #2 | Chains: B
EXOSOME COMPLEX EXONUCLEASE 1 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15134
95 % 1 10 907 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 1 10 941
70 % 1 10 975
50 % 1 19 740
40 % 1 20 758
30 % 1 42 481
Entity #3 | Chains: I
EXOSOME COMPLEX RNA-BINDING PROTEIN 1 protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20314
95 % 1 6 9137 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.4
PDBFlex
90 % 1 6 9047
70 % 1 6 8678
50 % 1 6 7861
40 % 1 6 7229
30 % 1 6 6384

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.