Sequence Similarity Clusters for the Entities in PDB 2J9N

Entity #1 | Chains: A
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 404 27
95 % 121 463 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 121 463 21
70 % 131 547 18
50 % 136 698 14
40 % 246 1720 4
30 % 252 1870 6
Entity #2 | Chains: B
UNKNOWN PEPTIDE protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
UNKNOWN PEPTIDE protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures