Sequence Similarity Clusters for the Entities in PDB 2IZV

Entity #1 | Chains: A
SUPPRESSOR OF CYTOKINE SIGNALING 4 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63532
95 % 1 1 44266
90 % 1 1 41994
70 % 1 1 36915
50 % 1 1 31426
40 % 1 1 27709
30 % 1 1 23479
Entity #2 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 18 956
95 % 7 20 1219 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 7 20 1246
70 % 7 20 1277
50 % 7 20 1337
40 % 7 20 1348
30 % 7 20 1322
Entity #3 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 47 185
95 % 26 48 247 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 26 48 263
70 % 26 48 297
50 % 26 48 345
40 % 26 48 363
30 % 26 49 362

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures