Sequence Similarity Clusters for the Entities in PDB 2IZV

Entity #1 | Chains: A
SUPPRESSOR OF CYTOKINE SIGNALING 4 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55321
95 % 1 1 45431
90 % 1 1 43216
70 % 1 1 38068
50 % 1 1 32308
40 % 1 1 28301
30 % 1 1 23638
Entity #2 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 968
95 % 7 21 1177 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 7 21 1199
70 % 7 21 1232
50 % 7 21 1285
40 % 7 21 1279
30 % 7 21 1277
Entity #3 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 52 186
95 % 26 52 239 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 26 52 248
70 % 26 52 279
50 % 26 52 312
40 % 26 53 341
30 % 26 53 346

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures