2IH2

Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 5-methylpyrimidin-2(1H)-one at the target base partner position


Sequence Similarity Clusters for the Entities in PDB 2IH2

Entity #1 | Chains: B,E
5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,F
5'-D(*GP*AP*CP*AP*(5PY)P*CP*GP*(6MA)P*AP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,D
Modification methylase TaqI protein, length: 421 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 5463
95 % 1 12 3811
90 % 1 12 3846
70 % 1 12 3862
50 % 1 12 3791
40 % 1 12 3774
30 % 1 12 3677

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2IH2 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
2 2IBT 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
3 2IH5 3 A Modification methylase TaqI 271 2.1.1.72 | Details
4 2NP7 3 A Modification methylase TaqI 271 2.1.1.72 | Details
5 2JG3 1 A, D MODIFICATION METHYLASE TAQI ADENINE-SPECIFIC METHYLTRANSFERASE TAQI, M. TAQI 271 2.1.1.72 | Details
6 1G38 3 A, D MODIFICATION METHYLASE TAQI RESIDUES 21 - 413 271 2.1.1.72 | Details
7 2IH4 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
8 2NP6 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
9 2IBS 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
10 1AQJ 1 A, B ADENINE-N6-DNA-METHYLTRANSFERASE TAQI 271 2.1.1.72 | Details
11 2ADM 1 A, B ADENINE-N6-DNA-METHYLTRANSFERASE TAQI S-ADENOSYL-METHIONINE AS LIGAND 271 2.1.1.72 | Details
12 1AQI 1 A, B ADENINE-N6-DNA-METHYLTRANSFERASE TAQI 271 2.1.1.72 | Details