Sequence Similarity Clusters for the Entities in PDB 2IFF

Entity #1 | Chains: L
IGG1 HYHEL-5 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24192
95 % 20 20 1526
90 % 136 136 134
70 % 1583 1583 3
50 % 3845 3846 1
40 % 3846 3847 1
30 % 4571 4574 1
Entity #2 | Chains: H
IGG1 HYHEL-5 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35545
95 % 3 3 20173
90 % 12 12 3112
70 % 1866 1866 1
50 % 3846 3846 1
40 % 3847 3847 1
30 % 4572 4574 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58866
95 % 617 627 4
90 % 633 644 5
70 % 848 859 6
50 % 857 868 6
40 % 891 902 10
30 % 891 902 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.