Sequence Similarity Clusters for the Entities in PDB 2IFF

Entity #1 | Chains: L
IGG1 HYHEL-5 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24397
95 % 20 20 1537
90 % 136 136 136
70 % 1611 1611 3
50 % 3907 3908 1
40 % 3908 3909 1
30 % 4634 4637 1
Entity #2 | Chains: H
IGG1 HYHEL-5 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35831
95 % 3 3 20341
90 % 12 12 3145
70 % 1896 1896 1
50 % 3908 3908 1
40 % 3909 3909 1
30 % 4635 4637 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59277
95 % 620 630 4
90 % 636 647 5
70 % 851 862 6
50 % 860 871 6
40 % 894 905 10
30 % 894 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.