Sequence Similarity Clusters for the Entities in PDB 2IFF

Entity #1 | Chains: L
IGG1 HYHEL-5 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24758
95 % 20 20 1566
90 % 140 140 135
70 % 1639 1639 3
50 % 3984 3985 1
40 % 3985 3986 1
30 % 4712 4715 1
Entity #2 | Chains: H
IGG1 HYHEL-5 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36316
95 % 3 3 20598
90 % 12 12 3186
70 % 1932 1932 1
50 % 3985 3985 1
40 % 3986 3986 1
30 % 4713 4715 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60108
95 % 626 636 4
90 % 642 653 5
70 % 857 868 6
50 % 866 877 6
40 % 900 911 10
30 % 900 911 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.