Sequence Similarity Clusters for the Entities in PDB 2IFF

Entity #1 | Chains: L
IGG1 HYHEL-5 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26375
95 % 22 22 1515
90 % 144 144 139
70 % 1775 1775 2
50 % 4366 4367 1
40 % 4366 4367 1
30 % 5148 5151 1
Entity #2 | Chains: H
IGG1 HYHEL-5 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38681
95 % 3 3 21896
90 % 12 12 3428
70 % 2111 2111 1
50 % 4367 4367 1
40 % 4367 4367 1
30 % 5149 5151 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63644
95 % 674 684 4
90 % 690 701 5
70 % 906 917 6
50 % 914 925 6
40 % 948 959 11
30 % 948 959 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.