Sequence Similarity Clusters for the Entities in PDB 2IFF

Entity #1 | Chains: L
IGG1 HYHEL-5 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27481
95 % 22 22 1589
90 % 145 145 141
70 % 2280 2280 1
50 % 4618 4619 1
40 % 4618 4619 1
30 % 5437 5440 1
Entity #2 | Chains: H
IGG1 HYHEL-5 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40175
95 % 3 3 22830
90 % 13 13 3132
70 % 2238 2238 2
50 % 4619 4619 1
40 % 4619 4619 1
30 % 5438 5440 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65895
95 % 693 703 4
90 % 709 720 5
70 % 926 937 7
50 % 934 945 7
40 % 968 979 11
30 % 968 979 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.