Sequence Similarity Clusters for the Entities in PDB 2I0C

Entity #1 | Chains: A,B
Glutamate receptor, ionotropic kainate 2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41696
95 % 25 30 720 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.7
PDBFlex
90 % 25 31 663
70 % 67 88 238
50 % 222 278 37
40 % 223 279 50
30 % 278 360 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures