Sequence Similarity Clusters for the Entities in PDB 2HHE

Entity #1 | Chains: A,C
HEMOGLOBIN (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 144 254 12
95 % 151 265 16 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 151 265 17
70 % 171 332 17
50 % 408 754 4
40 % 413 759 7
30 % 857 1293 6
Entity #2 | Chains: B,D
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 126 214 42
95 % 150 250 20 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 153 255 21
70 % 186 346 14
50 % 409 754 4
40 % 414 759 7
30 % 858 1293 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures