Sequence Similarity Clusters for the Entities in PDB 2HHD

Entity #1 | Chains: A,C
HEMOGLOBIN (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 79 211 25
95 % 91 242 32
90 % 92 243 33
70 % 113 324 16
50 % 276 738 4
40 % 280 743 7
30 % 655 1186 8
Entity #2 | Chains: B,D
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 64 161 53
95 % 98 242 31
90 % 101 247 20
70 % 126 338 13
50 % 277 738 4
40 % 281 743 7
30 % 656 1186 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.