Sequence Similarity Clusters for the Entities in PDB 2H4M

Entity #1 | Chains: A,B
Transportin-1 protein, length: 865 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31013
95 % 8 15 2928
90 % 8 15 2967
70 % 8 15 2931
50 % 8 15 2891
40 % 8 15 2842
30 % 8 15 2665
Entity #2 | Chains: C,D
Heterogeneous nuclear ribonucleoprotein A1 protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49629
95 % 1 1 37071
90 % 1 1 35386
70 % 1 1 31448
50 % 1 1 26891
40 % 1 1 23745
30 % 1 1 20172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures