Sequence Similarity Clusters for the Entities in PDB 2GBP

Entity #1 | Chains: A
D-GALACTOSE/D-GLUCOSE BINDING PROTEIN protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 7879
95 % 5 9 7943 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.8
PDBFlex
90 % 9 13 5090
70 % 10 14 4658
50 % 11 15 4230
40 % 11 15 4007
30 % 43 73 537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures