Sequence Similarity Clusters for the Entities in PDB 2GBP

Entity #1 | Chains: A
D-GALACTOSE/D-GLUCOSE BINDING PROTEIN protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 8173
95 % 5 9 8219 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.8
PDBFlex
90 % 9 13 5275
70 % 10 14 4816
50 % 11 15 4334
40 % 11 15 4107
30 % 43 73 553

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures