Sequence Similarity Clusters for the Entities in PDB 2FWO

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, K-D alpha chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 14994
95 % 11 11 3502
90 % 11 11 3547
70 % 643 716 6
50 % 645 721 6
40 % 686 772 10
30 % 766 896 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 112 135 94
95 % 181 228 60 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 181 228 65
70 % 791 912 4
50 % 805 934 3
40 % 805 934 7
30 % 805 934 12
Entity #3 | Chains: P
TYQRTRALV peptide from Nucleoprotein protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.