Sequence Similarity Clusters for the Entities in PDB 2FUF

Entity #1 | Chains: A
Large T antigen protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 5467
95 % 1 14 3305 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 14 3373
70 % 2 18 2639
50 % 2 19 2311
40 % 2 19 2278
30 % 2 19 2151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2FUF 1 A Large T antigen DNA binding domain (residues 131-259) 1891767 3.6.4 | Details
2 2IPR 1 A, B large T antigen Origin binding domain (residues 131-259) 1891767
3 3QK2 1 A Large T antigen origin binding domain 1891767 3.6.4 | Details
4 3QN2 1 A Large T antigen origin binding domain 1891767 3.6.4 | Details
5 5D9I 1 A, B Large T antigen unp residues 131-260 1891767 3.6.4 | Details
6 2ITL 3 A, B large T antigen Origin binding domain (residues 131-259) 1891767
7 2NTC 3 A, B large T antigen Origin binding domain (residues 131-259) 1891767
8 2NL8 2 A large T antigen Origin binding domain (residues 131-259) 1891767
9 2ITJ 1 A, B large T antigen Origin binding domain (residues 131-259) 1891767
10 2IF9 1 A, B Large T antigen origin binding domain 1891767
11 4FGN 1 A, B Large T antigen origin binding domain, UNP residues 131-260 1891767 3.6.4 | Details
12 1Z1D 2 B Large T antigen SV40 T antigen Origin binding domain 1891767 3.6.4 | Details
13 2TBD 1 A SV40 T ANTIGEN DNA BINDING DOMAIN, RESIDUES 131 - 260 1891767
14 1TBD 1 A SV40 T-ANTIGEN DNA BINDING DOMAIN 1891767 3.6.4 | Details