Sequence Similarity Clusters for the Entities in PDB 2FO1

Entity #1 | Chains: B
5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Lin-12 and glp-1 phenotype protein 1, isoform b protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 16405
95 % 4 4 15080
90 % 4 4 14796
70 % 4 4 13854
50 % 10 12 3930
40 % 10 12 3774
30 % 10 12 3495
Entity #4 | Chains: D
Protein lag-3 protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68077
95 % 1 1 47041
90 % 1 1 44701
70 % 1 1 39348
50 % 1 1 33665
40 % 1 1 29694
30 % 1 1 25030
Entity #5 | Chains: E
Lin-12 protein protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51540
95 % 1 1 37376
90 % 1 1 35765
70 % 1 1 31892
50 % 1 1 27332
40 % 1 1 24171
30 % 1 1 20563

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.