POP-OUT | CLOSE

An Information Portal to 106858 Biological Macromolecular Structures

Crystal Structure of the CSL-Notch-Mastermind ternary complex bound to DNA
Sequence Clustering and Redundancy Reduction Results
2FO1
Sequence Clusters for the Sequence Entities in PDB 2FO1
Entity #1: Chains: B - 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - Lin-12 and glp-1 phenotype protein 1, isoform b protein, length: 477 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 4 13074
95% 4 4 12191
90% 4 4 11988
70% 4 4 11304
50% 8 10 3930
40% 8 10 3744
30% 8 10 3442
Entity #4: Chains: D - Protein lag-3 protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 56381
95% 1 1 39175
90% 1 1 37454
70% 1 1 33348
50% 1 1 28703
40% 1 1 25401
30% 1 1 21470
Entity #5: Chains: E - Lin-12 protein protein, length: 373 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41946
95% 1 1 30627
90% 1 1 29436
70% 1 1 26490
50% 1 1 22865
40% 1 1 20324
30% 1 1 17365
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.