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Crystal Structure of the CSL-Notch-Mastermind ternary complex bound to DNA
Sequence Clustering and Redundancy Reduction Results
2FO1
Sequence Clusters for the Sequence Entities in PDB 2FO1
Entity #1: Chains: B - 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - Lin-12 and glp-1 phenotype protein 1, isoform b protein, length: 477 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 4 13236
95% 4 4 12307
90% 4 4 12099
70% 4 4 11402
50% 8 10 3979
40% 8 10 3791
30% 8 10 3484
Entity #4: Chains: D - Protein lag-3 protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 57034
95% 1 1 39626
90% 1 1 37875
70% 1 1 33699
50% 1 1 29014
40% 1 1 25669
30% 1 1 21700
Entity #5: Chains: E - Lin-12 protein protein, length: 373 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 42490
95% 1 1 31028
90% 1 1 29814
70% 1 1 26802
50% 1 1 23141
40% 1 1 20564
30% 1 1 17570
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.