Sequence Similarity Clusters for the Entities in PDB 2FDP

Entity #1 | Chains: A,B,C
Beta-secretase 1 protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 251 280 25
95 % 332 368 15 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 332 368 17
70 % 332 368 24
50 % 342 380 54
40 % 342 380 75
30 % 1037 1126 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures