Sequence Similarity Clusters for the Entities in PDB 2FDP

Entity #1 | Chains: A,B,C
Beta-secretase 1 protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 247 279 21
95 % 326 362 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 326 362 16
70 % 326 362 24
50 % 336 374 40
40 % 336 374 51
30 % 336 374 70

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures