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CRYSTAL STRUCTURE OF FAB' FROM THE HIV-1 NEUTRALIZING ANTIBODY 2F5 IN COMPLEX WITH ITS GP41 EPITOPE
Sequence Clustering and Redundancy Reduction Results
2F5B
Sequence Clusters for the Sequence Entities in PDB 2F5B
Entity #1: Chains: L - PROTEIN (ANTIBODY 2F5 (LIGHT CHAIN)) protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 33 914
95% 8 41 997
90% 109 389 5
70% 402 1361 3
50% 981 3242 1
40% 982 3243 1
30% 1084 3827 1
Entity #2: Chains: H - PROTEIN (ANTIBODY 2F5 (HEAVY CHAIN)) protein, length: 235 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21334
95% 8 41 996
90% 8 41 1016
70% 476 1564 2
50% 982 3242 1
40% 983 3243 1
30% 1085 3827 1
Entity #3: Chains: P - PROTEIN (GP41 EPITOPE) protein, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.