Sequence Similarity Clusters for the Entities in PDB 2F5B

Entity #1 | Chains: L
PROTEIN (ANTIBODY 2F5 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1039
95 % 8 41 1146
90 % 143 518 3
70 % 494 1639 3
50 % 1224 3985 1
40 % 1225 3986 1
30 % 1361 4715 1
Entity #2 | Chains: H
PROTEIN (ANTIBODY 2F5 (HEAVY CHAIN)) protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24332
95 % 8 41 1144
90 % 8 41 1166
70 % 593 1932 1
50 % 1225 3985 1
40 % 1226 3986 1
30 % 1362 4715 1
Entity #3 | Chains: P
PROTEIN (GP41 EPITOPE) protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.