Sequence Similarity Clusters for the Entities in PDB 2EIZ

Entity #1 | Chains: A
ANTI-LYSOZYME ANTIBODY FV REGION protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 33381
95 % 1 3 27884 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 26903
70 % 13 28 2157
50 % 109 378 17
40 % 112 385 23
30 % 336 1200 6
Entity #2 | Chains: B
ANTI-LYSOZYME ANTIBODY FV REGION protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 75208
95 % 1 3 25490 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 3 24659
70 % 13 40 1269
50 % 225 797 6
40 % 225 799 6
30 % 337 1200 6
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 572 756 3
95 % 621 809 5 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 630 826 5
70 % 636 833 11
50 % 830 1059 9
40 % 833 1065 10
30 % 843 1094 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures