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RNA-dependent RNA polymerase of foot-and-mouth disease virus in complex with a template-primer RNA and ATP
Sequence Clustering and Redundancy Reduction Results
2EC0
Sequence Clusters for the Sequence Entities in PDB 2EC0
Entity #1: Chains: B,E - 5'-R(P*AP*UP*GP*GP*GP*CP*CP*C)-3' rna, length: 8 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C,F - 5'-R(*GP*GP*GP*CP*CP*CP*A)-3' rna, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A,D - RNA-dependent RNA polymerase protein, length: 476 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 8 4544
95% 16 22 1821
90% 16 22 1862
70% 16 22 1879
50% 16 22 1910
40% 18 26 1210
30% 70 80 312
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.