Sequence Similarity Clusters for the Entities in PDB 2EC0

Entity #1 | Chains: B,E
5'-R(P*AP*UP*GP*GP*GP*CP*CP*C)-3' rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,F
5'-R(*GP*GP*GP*CP*CP*CP*A)-3' rna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,D
RNA-dependent RNA polymerase protein, length: 476 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 5515
95 % 17 23 2137
90 % 17 23 2202
70 % 17 23 2205
50 % 17 23 2185
40 % 19 27 1379
30 % 86 96 327

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.