Sequence Similarity Clusters for the Entities in PDB 2E9R

Entity #1 | Chains: A
5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3' rna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
5'-R(*CP*CP*C*GP*GP*GP*CP*CP*C)-3' rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: X
RNA-dependent RNA polymerase protein, length: 476 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 5641
95 % 18 23 2169
90 % 18 23 2237
70 % 18 23 2240
50 % 18 23 2217
40 % 20 27 1398
30 % 87 96 333

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.