Sequence Similarity Clusters for the Entities in PDB 2DN1

Entity #1 | Chains: A
Hemoglobin alpha subunit protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 214 22
95 % 6 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 6 246 21
70 % 6 327 15
50 % 14 744 4
40 % 14 749 8
30 % 83 1198 8
Entity #2 | Chains: B
Hemoglobin beta subunit protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 164 50
95 % 5 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 5 250 19
70 % 5 341 12
50 % 15 744 4
40 % 15 749 8
30 % 84 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.