Sequence Similarity Clusters for the Entities in PDB 2DHB

Entity #1 | Chains: A
HEMOGLOBIN (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65646
95 % 18 18 2693
90 % 18 18 2743
70 % 327 327 15
50 % 743 744 4
40 % 748 749 8
30 % 1196 1198 8
Entity #2 | Chains: B
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65128
95 % 18 18 2690 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 18 18 2740
70 % 341 341 12
50 % 744 744 4
40 % 749 749 8
30 % 1197 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.