Sequence Similarity Clusters for the Entities in PDB 2D8W

Entity #1 | Chains: A
Cationic trypsin protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 362 389 34
95 % 413 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 413 448 34
70 % 472 532 18
50 % 549 683 14
40 % 1202 1695 4
30 % 1291 1845 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.