Sequence Similarity Clusters for the Entities in PDB 2D8W

Entity #1 | Chains: A
Cationic trypsin protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 380 412 39
95 % 431 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 431 471 20
70 % 492 557 19
50 % 569 708 14
40 % 1308 1863 4
30 % 1316 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures