Sequence Similarity Clusters for the Entities in PDB 2D8P

Entity #1 | Chains: A
Thaumatin I protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 57 61 594
95 % 116 121 318 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.3
PDBFlex
90 % 116 121 334
70 % 116 121 376
50 % 126 131 395
40 % 128 133 417
30 % 128 133 418

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures