Sequence Similarity Clusters for the Entities in PDB 2D8P

Entity #1 | Chains: A
Thaumatin I protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 59 609
95 % 114 118 308 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.3
PDBFlex
90 % 114 118 325
70 % 114 118 361
50 % 124 128 383
40 % 126 130 396
30 % 126 130 406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.