Sequence Similarity Clusters for the Entities in PDB 2D8O

Entity #1 | Chains: A
Thaumatin I protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 61 64 570
95 % 122 125 310 Flexibility: No
Max RMSD: 3.2, Avg RMSD: 0.3
PDBFlex
90 % 122 125 324
70 % 122 125 373
50 % 132 135 389
40 % 134 137 401
30 % 134 137 403

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures