Sequence Similarity Clusters for the Entities in PDB 2D3E

Entity #1 | Chains: A,B,C,D
General control protein GCN4 and Tropomyosin 1 alpha chain protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23672
95 % 1 1 20286 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 2.0
PDBFlex
90 % 1 1 19723
70 % 1 1 18168
50 % 1 1 15764
40 % 1 1 14027
30 % 1 1 11994

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures