Sequence Similarity Clusters for the Entities in PDB 2D3E

Entity #1 | Chains: A,B,C,D
General control protein GCN4 and Tropomyosin 1 alpha chain protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22373
95 % 1 1 19214 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 2.0
PDBFlex
90 % 1 1 18693
70 % 1 1 17277
50 % 1 1 15037
40 % 1 1 13392
30 % 1 1 11453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.