Sequence Similarity Clusters for the Entities in PDB 2D02

Entity #1 | Chains: A
Photoactive yellow protein protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67159
95 % 21 67 707 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 21 67 737
70 % 21 67 794
50 % 21 67 837
40 % 21 68 826
30 % 21 68 814

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.