Sequence Similarity Clusters for the Entities in PDB 2CMY

Entity #1 | Chains: A
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 397 425 38
95 % 439 471 19 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 439 471 22
70 % 507 558 19
50 % 606 708 14
40 % 1434 1873 4
30 % 1442 1887 7
Entity #2 | Chains: B
VERONICA HEDERIFOLIA TRYPSIN INHIBITOR protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53491
95 % 1 1 44040
90 % 1 1 41903
70 % 1 1 36965
50 % 1 1 31375
40 % 1 1 27496
30 % 1 1 22952

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures