Sequence Similarity Clusters for the Entities in PDB 2CMY

Entity #1 | Chains: A
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 369 389 34
95 % 421 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 421 448 34
70 % 486 532 19
50 % 586 683 14
40 % 1316 1696 4
30 % 1415 1846 6
Entity #2 | Chains: B
VERONICA HEDERIFOLIA TRYPSIN INHIBITOR protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74245
95 % 1 1 51775
90 % 1 1 49127
70 % 1 1 43015
50 % 1 1 36691
40 % 1 1 32337
30 % 1 1 27406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.