Sequence Similarity Clusters for the Entities in PDB 2CMY

Entity #1 | Chains: A
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 383 405 37
95 % 435 464 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 435 464 21
70 % 500 548 19
50 % 600 699 14
40 % 1336 1721 4
30 % 1435 1871 6
Entity #2 | Chains: B
VERONICA HEDERIFOLIA TRYPSIN INHIBITOR protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75616
95 % 1 1 52635
90 % 1 1 49897
70 % 1 1 43658
50 % 1 1 37218
40 % 1 1 32787
30 % 1 1 27775

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures