Sequence Similarity Clusters for the Entities in PDB 2CJM

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 271 364 21
95 % 280 379 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 280 379 34
70 % 280 379 41
50 % 293 404 55
40 % 302 460 43
30 % 2125 3787 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 86 159
95 % 39 105 147 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 43 109 153
70 % 43 109 171
50 % 43 109 205
40 % 43 109 229
30 % 46 182 227

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.