Sequence Similarity Clusters for the Entities in PDB 2CHA

Entity #1 | Chains: A,E
ALPHA-CHYMOTRYPSIN A protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,F
ALPHA-CHYMOTRYPSIN A protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 38 1065
95 % 38 38 1293 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 38 38 1320
70 % 40 40 1282
50 % 40 40 1320
40 % 46 46 1184
30 % 54 54 1021
Entity #3 | Chains: C,G
ALPHA-CHYMOTRYPSIN A protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 38 1076
95 % 38 38 1305 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 38 38 1330
70 % 40 40 1291
50 % 47 47 1159
40 % 56 56 995
30 % 56 56 991

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1YPH 3 E, F CHYMOTRYPSIN A, chain C 9913 3.4.21.1 | Details
2 1GG6 3 C GAMMA CHYMOTRYPSIN 9913 3.4.21.1 | Details
3 1GGD 3 C GAMMA CHYMOTRYPSIN 9913 3.4.21.1 | Details
4 2P8O 3 C Chymotrypsin A chain C 9913 3.4.21.1 | Details
5 1GCT 3 C GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
6 3GCT 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
7 3RU4 5 E Chymotrypsinogen A 9913 3.4.21.1 | Details
8 1AB9 3 C GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
9 3VGC 3 C GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
10 1CHO 3 G ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
11 2GCT 3 C GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
12 5XW1 2 B Trypsin UNP residues 134-231 9823 3.4.21.4 | Details
13 3PO1 3 C Thrombin heavy chain 9606 3.4.21.5 | Details
14 1AFQ 3 C BOVINE GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
15 5XWA 2 B Trypsin UNP residues 134-231 9823 3.4.21.4 | Details
16 1EPT 3 C PORCINE E-TRYPSIN 9823 3.4.21.4 | Details
17 2GMT 3 C GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
18 7GCH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
19 1AKS 2 B ALPHA TRYPSIN 9823 3.4.21.4 | Details
20 6CHA 3 C, G ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
21 5XW8 2 B Trypsin UNP residues 134-231 9823 3.4.21.4 | Details
22 1GHB 3 G GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
23 2GCH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
24 2VGC 3 C GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
25 5XW9 2 B Trypsin UNP residues 134-231 9823 3.4.21.4 | Details
26 1VGC 3 C GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
27 3GCH 3 C GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
28 4GCH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
29 6GCH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
30 1N8O 3 C Chymotrypsin A, C chain 9913 3.4.21.1 | Details
31 1GHA 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
32 1GMH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
33 1UCY 3 E THROMBIN CHYMOTRYPSINOGEN NUMBERING (RATHER THAN SEQUENTIAL) SYSTEM IS USED, BASED ON THE TOPOLOGICAL ALIGNMENT WITH THE STRUCTURE OF CHYMOTRYPSINOGEN (H.BRANDSTETTER ET AL., 1992, J.MOL.BIOL., V. 226, 1085). THE N-TERMINUS OF THE FIBRINOPEPTIDE IS ACETYLATED. FIBRINOPEPTIDE SEQUENCE NUMBERS ARE ACE 6 TO ARG 19. A NEW RESIDUE, OPR, HAS BEEN DEFINED FOR THE ARG/GLY COMBINATION IN WHICH THE AMIDE NITROGEN HAS BEEN REPLACED WITH A CH2, MAKING THE NORMAL AMIDE BOND BETWEEN THESE TWO RESIDUES A KETONE BOND. THE FIBRINOPEPTIDE NUMBERING IS CONSEQUENTLY INCREMENTED BY 1 AFTER THIS RESIDUE IN KEEPING WITH THE FIBRINOGEN NUMBERING SCHEME. THERE ARE ALTERNATE CONFORMATIONS FOR RESIDUES PRO 18 AND ARG 19 IN FIBRINOPEPTIDE III. 9913 3.4.21.5 | Details
34 4VGC 3 C GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
35 1GMC 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
36 1GMD 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
37 1RIW 3 C thrombin heavy chain, C residues 185-286 9606 3.4.21.5 | Details
38 1UHB 2 B Trypsin 9823 3.4.21.4 | Details
39 1BBR 3 E EPSILON-THROMBIN 9913 3.4.21.5 | Details
40 1CA0 3 C, H BOVINE CHYMOTRYPSIN 9913 3.4.21.1 | Details
41 1BHX 3 F ALPHA THROMBIN 9606 3.4.21.5 | Details
42 2HNT 4 F GAMMA-THROMBIN 9606 3.4.21.5 | Details
43 1HJA 3 C ALPHA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
44 1YCP 5 M EPSILON THROMBIN 9913 3.4.21.5 | Details
45 2PKS 3 C Thrombin heavy chain fragment Residues 518-619 9606 3.4.21.5 | Details
46 5GCH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
47 3BG4 3 C Chymotrypsin A chain C 9913 3.4.21.1 | Details
48 1CBW 3 C, H BOVINE CHYMOTRYPSIN 9913 3.4.21.1 | Details
49 2JET 3 C CHYMOTRYPSINOGEN B CHAIN C RESIDUES 165-263 10116 3.4.21.1 | Details
50 1KDQ 2 B CHYMOTRYPSIN B, C CHAIN 10116 3.4.21.1 | Details
51 1VIT 5 G EPSILON THROMBIN 9913 3.4.21.5 | Details
52 1MTN 3 C, G ALPHA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
53 8GCH 3 G GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
54 5CHA 3 C, G ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
55 4CHA 3 C, G ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
56 2CHA 3 C, G ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details