Sequence Similarity Clusters for the Entities in PDB 2CHA

Entity #1 | Chains: A,E
ALPHA-CHYMOTRYPSIN A protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,F
ALPHA-CHYMOTRYPSIN A protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 38 996
95 % 38 38 1210 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 38 38 1234
70 % 40 40 1217
50 % 40 40 1258
40 % 46 46 1144
30 % 54 54 982
Entity #3 | Chains: C,G
ALPHA-CHYMOTRYPSIN A protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 38 1011
95 % 38 38 1228 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 38 38 1250
70 % 40 40 1227
50 % 47 47 1109
40 % 56 56 950
30 % 56 56 944

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures