Sequence Similarity Clusters for the Entities in PDB 2CGT

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
60 KDA GROEL protein, length: 547 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 59
95 % 38 43 13
90 % 38 43 14
70 % 38 43 22
50 % 45 50 17
40 % 45 50 27
30 % 45 50 44
Entity #2 | Chains: O,P,Q,R,S,T,U
CAPSID ASSEMBLY PROTEIN GP31 protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 4011
95 % 2 2 4785
90 % 2 2 4799
70 % 2 2 4708
50 % 2 2 4520
40 % 2 2 4294
30 % 2 2 3939

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.