Sequence Similarity Clusters for the Entities in PDB 2CGT

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
60 KDA GROEL protein, length: 547 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 22 90
95 % 40 45 13
90 % 40 45 15
70 % 40 45 23
50 % 47 52 28
40 % 47 52 40
30 % 47 52 60
Entity #2 | Chains: O,P,Q,R,S,T,U
CAPSID ASSEMBLY PROTEIN GP31 protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 5131
95 % 2 2 5456
90 % 2 2 5463
70 % 2 2 5323
50 % 2 2 5030
40 % 2 2 4739
30 % 2 2 4247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures